Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs3128917
rs3128917
HLA-DPA2
0.925 0.200 6 33092219 non coding transcript exon variant T/G snv 0.33
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs7574865
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.900 0.966 3 2007 2017
dbSNP: rs7775397
rs7775397
TSBP1 ; TSBP1-AS1
0.790 0.400 6 32293475 missense variant T/G snv 6.0E-02 6.4E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs9275141
rs9275141 		0.827 0.240 6 32683340 intergenic variant T/G snv 0.50
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 3 2007 2011
dbSNP: rs1063355
rs1063355
HLA-DQB1 ; HLA-DQB1-AS1
0.827 0.320 6 32659937 3 prime UTR variant T/G snv 0.56
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs130067
rs130067
CCHCR1
0.851 0.200 6 31150734 missense variant T/G snv 0.23 0.21
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs2844654
rs2844654
DDR1-DT
1.000 0.120 6 30870911 intron variant T/G snv 0.28
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs3117582
rs3117582
BAG6 ; APOM
0.716 0.440 6 31652743 intron variant T/G snv 7.1E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2011
dbSNP: rs7192
rs7192
HLA-DRA
0.827 0.200 6 32443869 missense variant T/G snv 0.64 0.61
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2011
dbSNP: rs7752903
rs7752903 		1.000 0.120 6 137906227 upstream gene variant T/G snv 3.3E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.800 1.000 2 2012 2019
dbSNP: rs10484566
rs10484566
PSMB9
0.925 0.200 6 32867481 regulatory region variant T/G snv 6.8E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2009 2009
dbSNP: rs12035317
rs12035317
MAGI3
1.000 0.120 1 113553475 intron variant T/G snv 0.22
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2009 2009
dbSNP: rs1362089
rs1362089
TRIM26BP ; HCG17
1.000 0.120 6 30242025 splice region variant T/G snv 0.43
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2009 2009
dbSNP: rs2235359
rs2235359
ZKSCAN4
0.925 0.160 6 28247863 intron variant T/G snv 0.20
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2009 2009
dbSNP: rs2239805
rs2239805
HLA-DRA
1.000 0.120 6 32443599 intron variant T/G snv 0.13
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs2395174
rs2395174 		0.827 0.320 6 32437101 upstream gene variant T/G snv 0.24
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs2524053
rs2524053
HLA-B
1.000 0.120 6 31284692 intron variant T/G snv 0.66
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs2647003
rs2647003 		1.000 0.120 6 32697103 regulatory region variant T/G snv 0.64
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs2772548
rs2772548
LOC107987063
1.000 0.120 9 34670991 intron variant T/G snv 0.56
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2009 2009
dbSNP: rs2894254
rs2894254
TSBP1-AS1
1.000 0.120 6 32377912 intron variant T/G snv 6.4E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs3091284
rs3091284
HLA-DPB1
1.000 0.120 6 33089467 3 prime UTR variant T/G snv 0.32
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs3115575
rs3115575 		1.000 0.120 6 32249114 intergenic variant T/G snv 0.41
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs3117294
rs3117294 		1.000 0.120 6 29685552 upstream gene variant T/G snv 0.41
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2009 2009
dbSNP: rs3130268
rs3130268 		1.000 0.120 6 33339623 downstream gene variant T/G snv 0.45
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs3132931
rs3132931
TSBP1-AS1
1.000 0.120 6 32268118 intron variant T/G snv 0.20
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011